Contact us

SeqOne S.A.S

Address
SeqOne S.A.S.
22 Rue Durand
34000 Montpellier, France
Contact
Pauline
+33 (0) 9 54 40 42 84
contact@seq.one

The seqone plateform

KEY FEATURES
  • Catalog of analysis-specific bioinformatic applications
  • Automated raw data import from sequencer
  • Detailed quality control with exon-byexon coverage reports
  • Clinical report generation
  • Integration with Laboratory Information
  • Management System (LIMS), Electronic
  • Patient Record (EPR)
  • Detailed variant page
  • Analysis-specific data validation
  • Manifest management
  • Artefact detection
  • Detailed logging of all events for traceability
  • CE IVD certified
  • Medical Grade Data Hosting (HDS)
DATABASES

Annotation database management simplifies updates and the inclusion of user-specific databases. The resource manager provides versioning which in turn ensures reproducibility of analysis results;

DATABASES AVAILABLE

  • Civic
  • OMIM
  • COSMIC
  • Clinvar
  • Other databases linkable upon request

SHARED KNOWLEDGE BASE

A shared knowledge base allows users to save and export variants they have annotated and provides the option to share them with collaborators or the community at large.

SEQUENCING APPROACH
  • Agilent
  • DT
  • Twist Biosciences
  • Illumina
WETLAB KIT COMPATIBILITY
  • Gene Panel
  • Whole Exam Sequencing
  • Whole Genome Sequencing
  • RNA Seq
GENOMIC ANALYSES AND VARIANTS

BIOINFORMATIC APPLICATIONS

  • Somatic Healthy vs. Tumoural
  • Somatic Tumoral
  • Germlimne Family (multi-sample)
  • Germline mono (single sample) GENOMIC EVENTS
  • Copy Number Variants (CNV)
  • Structural Variant (SV)
  • Single Neucleotide Polymorphisms (SNP)
  • RNA expression
  • Gene fusion detection
SEQUENCER & FILE FORMAT SUPPORT

SEQUENCERS:

  • Illumina
  • PGM / Ion Torrent
  • Pac Bio
  • Oxford Nanopore (coming soon)

SUPPORTED DATA FORMATS:

  • FastQ,
  • BCL,
  • BAM
  • VCF
Ils nous font confiance!
Next generation genomic analysis for next generation healthcare